Shape matters: Unsupervised Exploration of Glioblastoma Imaging Survival Predictors

Poster No:

1458 

Submission Type:

Abstract Submission 

Authors:

Martha Foltyn-Dumitru1, Mustafa Mahmutoglu1, Felix Sahm1, Wolfgang Wick1, Martin Bendszus1, Philipp Vollmuth1, Marianne Schell1

Institutions:

1Heidelberg University Hospital, Heidelberg, Germany

First Author:

Martha Foltyn-Dumitru  
Heidelberg University Hospital
Heidelberg, Germany

Co-Author(s):

Mustafa Mahmutoglu  
Heidelberg University Hospital
Heidelberg, Germany
Felix Sahm  
Heidelberg University Hospital
Heidelberg, Germany
Wolfgang Wick  
Heidelberg University Hospital
Heidelberg, Germany
Martin Bendszus  
Heidelberg University Hospital
Heidelberg, Germany
Philipp Vollmuth  
Heidelberg University Hospital
Heidelberg, Germany
Marianne Schell  
Heidelberg University Hospital
Heidelberg, Germany

Introduction:

Within glioblastoma research, conventional metrics such as 2D/3D tumor size measurements have long served as reliable prognostic indicators. However, the complete prognostic potential of sophisticated structural parameters, particularly morphological radiomics, remains to be thoroughly explored. This investigation delves into a clustering technique on morphological radiomics along with tumor volume to unveil distinct glioblastoma phenotypes, assessing their prognostic impact on overall survival (OS).

Methods:

A retrospective study included 436 glioblastoma patients (2009-2020) from Heidelberg University Hospital. Data were split into training and test datasets (80:20 ratio), with external validation using the UCSF glioma dataset including 397 patients (Calabrese et al., 2022). MRI acquisition involved 3D T1-weighted imaging (pre/post contrast administration), axial 2D FLAIR, and T2-weighted imaging.
Automated tumor segmentation was performed using a variant of HD-GLIO (Isensee et al., 2019; Kickingereder et al., 2019). PyRadiomics facilitated the radiomic feature extraction of nine morphological radiomic features from the tumor (van Griethuysen et al., 2017), and the total tumor volume was ascertained. Threshold determination for morphological radiomic features and tumor volume involved hierarchical Bayesian modeling within a Cox proportional hazards framework for OS (Chen et al., 2014; Fang et al., 2017). Parameters were binarized according to their respective thresholds. Subsequently, a Gower distance was computed using these binarized parameters, serving as the foundational metric for subsequent partition around medoids (PAM) clustering (Hennig, 2023; Maechler et al., 2022). Cluster robustness was quantitatively appraised using the Jaccard index across 500 bootstrap iterations.
Survival rates were visualized using Kaplan-Meier curves and tested for significance by log-rank test. Univariate and multivariate Cox regression models, adjusted for clinical covariates, explored cluster and tumor volume impact on OS. Discriminative ability was evaluated using the concordance probability (C index) and Akaike information criterion (AIC). ANOVA compared C indices for embedded models, and the evidence ratio from AIC assessed differences between non-embedded models.

Results:

PAM clustering identified two clusters with the highest silhouette coefficient (width=0.44) and high stability (Jaccard index: 0.94 for cluster 1, 0.89 for cluster 2). Cluster composition analysis showed distinct patterns: Cluster 1 (n=233) had a higher proportion of patients with higher Sphericity and Elongation, while Cluster 2 (n=115) had a higher proportion of patients with higher Maximum 3D Diameter, Surface Area, Axis Lengths, and tumor volume (p<0.001 for each).
OS differed significantly between clusters: Cluster 1 showed median OS of 18.8, 23.8, and 20.1 months in the training, test, and UCSF datasets, respectively, whereas Cluster 2 showed 11.7, 11.4, and 13.7 months (p<0.003 for all; Figure 1). Univariate Cox regression linked cluster affiliation with OS (HR=2.25, p=0.003, C index=0.625) in the test dataset. Multivariate Cox regression showed improved performance with cluster affiliation over clinical data alone (C index 0.67 vs. 0.59, p=0.003) and further enhanced predictive accuracy with preoperative ECOG status (C index=0.68, p=0.005). Cluster-based models outperformed the models with tumor volume alone (evidence ratio 5.16-5.37; Table 1).
Supporting Image: Figure_1.jpg
   ·Kaplan-Meier plots of OS in the training (A), test (B), and UCSF dataset (C), stratified to low or high-risk groups according to clustering. Significance was calculated using the log-rank test.
Supporting Image: Table_1.jpg
 

Conclusions:

Data-driven clustering reveals clinically relevant imaging phenotypes. This underscores the enhanced prognostic value achieved by combining morphological radiomics with tumor size, emphasizing the superiority of this integrated approach over relying solely on tumor size when predicting survival outcomes in glioblastoma patients.

Disorders of the Nervous System:

Neurodegenerative/ Late Life (eg. Parkinson’s, Alzheimer’s)

Modeling and Analysis Methods:

Classification and Predictive Modeling 1
Multivariate Approaches

Novel Imaging Acquisition Methods:

Multi-Modal Imaging 2

Keywords:

ADULTS
Data analysis
Machine Learning
Modeling
Neoplastic Disease
Neurological

1|2Indicates the priority used for review

Provide references using author date format

Calabrese, E., Villanueva-Meyer, J. E., Rudie, J. D., Rauschecker, A. M., Baid, U., Bakas, S., Cha, S., Mongan, J. T., & Hess, C. P. (2022). The University of California San Francisco Preoperative Diffuse Glioma MRI Dataset. Radiol Artif Intell, 4(6), e220058. https://doi.org/10.1148/ryai.220058
Chen, B. E., Jiang, W., & Tu, D. (2014). A hierarchical Bayes model for biomarker subset effects in clinical trials. Computational Statistics & Data Analysis, 71, 324-334. https://doi.org/https://doi.org/10.1016/j.csda.2013.05.015
Fang, T., Mackillop, W., Jiang, W., Hildesheim, A., Wacholder, S., & Chen, B. E. (2017). A Bayesian method for risk window estimation with application to HPV vaccine trial. Computational Statistics and Data Analysis.
Hennig, C. (2023). fpc: Flexible Procedures for Clustering. In https://www.unibo.it/sitoweb/christian.hennig/en/
Isensee, F., Schell, M., Pflueger, I., Brugnara, G., Bonekamp, D., Neuberger, U., Wick, A., Schlemmer, H. P., Heiland, S., Wick, W., Bendszus, M., Maier-Hein, K. H., & Kickingereder, P. (2019). Automated brain extraction of multisequence MRI using artificial neural networks. Hum Brain Mapp, 40(17), 4952-4964. https://doi.org/10.1002/hbm.24750
Kickingereder, P., Isensee, F., Tursunova, I., Petersen, J., Neuberger, U., Bonekamp, D., Brugnara, G., Schell, M., Kessler, T., Foltyn, M., Harting, I., Sahm, F., Prager, M., Nowosielski, M., Wick, A., Nolden, M., Radbruch, A., Debus, J., Schlemmer, H. P., . . . Maier-Hein, K. H. (2019). Automated quantitative tumour response assessment of MRI in neuro-oncology with artificial neural networks: a multicentre, retrospective study. Lancet Oncol, 20(5), 728-740. https://doi.org/10.1016/s1470-2045(19)30098-1
Maechler, M., Rousseeuw, P., Struyf, A., & Hubert, M. (2022). cluster: "Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al. In https://svn.r-project.org/R-packages/trunk/cluster/
van Griethuysen, J. J. M., Fedorov, A., Parmar, C., Hosny, A., Aucoin, N., Narayan, V., Beets-Tan, R. G. H., Fillion-Robin, J. C., Pieper, S., & Aerts, H. (2017). Computational Radiomics System to Decode the Radiographic Phenotype. Cancer Res, 77(21), e104-e107. https://doi.org/10.1158/0008-5472.CAN-17-0339