Predicting Mental and Neurological Illnesses Using Cerebellar Heterogeneity

Poster No:

1398 

Submission Type:

Abstract Submission 

Authors:

Milin Kim1, Nitin Sharma2, Esten Leonardsen3, Saige Rutherford4, Geir Selbæk5, Karin Persson5, Nils Eiel Steen6, Olav Smeland7, Torill Ueland8, Geneviève Richard7, Aikaterina Manoli9, Sofie Valk9, Christian Beckmann10, Andre Marquand11, Ole Andreassen12, Lars Westlye13, Thomas Wolfers14, Torgeir Moberget15

Institutions:

1Norwegian Centre for Mental Disorders Research (NORMENT),Oslo University Hospital & Institute of Cli, Oslo, Oslo, 2University of Tübingen;German Center for Mental Health (DZPG), Tübingen, Germany, 3NORMENT; University of Oslo, Oslo, Norway, 4Radboud University, Nijmegen, Netherlands, 5Oslo University Hospital; The Norwegian National Centre for Ageing and Health, Oslo, Norway, 6NORMENT, Division of Mental Health and Addiction, Oslo University Hospital & University of Oslo, Oslo, Norway, 7Norwegian Centre for Mental Disorders Research (NORMENT), Oslo, Norway, 8Norwegian Centre for Mental Disorders Research (NORMENT);University of Oslo, Oslo, Norway, 9Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany, 10Donders Institute for Brain, Cognition, and Behavior, Radboud University Nijmegen, Nijmegen, NL, Nijmegen, Netherlands, 11Radboud University Nijmegen, Nijmegen, Gelderland, 12NORMENT, Oslo, Norway, 13Norwegian Centre for Mental Disorders Research (NORMENT), Oslo University Hospital, Oslo, Norway, 14Laboratory for Mental Health Mapping, University of Tübingen, Tübingen, BW, 15Norwegian Centre for Mental Disorders Research (NORMENT); OsloMet, Oslo, Norway

First Author:

Milin Kim  
Norwegian Centre for Mental Disorders Research (NORMENT),Oslo University Hospital & Institute of Cli
Oslo, Oslo

Co-Author(s):

Nitin Sharma  
University of Tübingen;German Center for Mental Health (DZPG)
Tübingen, Germany
Esten Leonardsen  
NORMENT; University of Oslo
Oslo, Norway
Saige Rutherford  
Radboud University
Nijmegen, Netherlands
Geir Selbæk  
Oslo University Hospital; The Norwegian National Centre for Ageing and Health
Oslo, Norway
Karin Persson  
Oslo University Hospital; The Norwegian National Centre for Ageing and Health
Oslo, Norway
Nils Eiel Steen  
NORMENT, Division of Mental Health and Addiction, Oslo University Hospital & University of Oslo
Oslo, Norway
Olav Smeland  
Norwegian Centre for Mental Disorders Research (NORMENT)
Oslo, Norway
Torill Ueland  
Norwegian Centre for Mental Disorders Research (NORMENT);University of Oslo
Oslo, Norway
Geneviève Richard  
Norwegian Centre for Mental Disorders Research (NORMENT)
Oslo, Norway
Aikaterina Manoli  
Max Planck Institute for Human Cognitive and Brain Sciences
Leipzig, Germany
Sofie Valk  
Max Planck Institute for Human Cognitive and Brain Sciences
Leipzig, Germany
Christian Beckmann  
Donders Institute for Brain, Cognition, and Behavior, Radboud University Nijmegen, Nijmegen, NL
Nijmegen, Netherlands
Andre Marquand  
Radboud University Nijmegen
Nijmegen, Gelderland
Ole Andreassen  
NORMENT
Oslo, Norway
Lars Westlye  
Norwegian Centre for Mental Disorders Research (NORMENT), Oslo University Hospital
Oslo, Norway
Thomas Wolfers  
Laboratory for Mental Health Mapping, University of Tübingen
Tübingen, BW
Torgeir Moberget  
Norwegian Centre for Mental Disorders Research (NORMENT); OsloMet
Oslo, Norway

Introduction:

The cerebellum has been associated not only with motor coordination but also with cognitive and emotional processing, extending its relevance to a broad spectrum of clinical conditions. As the case-control model overlooks individual-level variability, normative models have been used to map normative development and aging across the lifespan. The normative model is analogous to a paediatric growth chart used to examine how individuals develop and age. Therefore, we predicted mental and neurological illnesses, including autism spectrum disorder (ASD), mild cognitive impairment (MCI), Alzheimer's disease (AD), bipolar disorder (BD), and schizophrenia (SZ), using the cerebellar lobular and voxel-wise normative modelling features. By assessing the predictive performance of the machine learning models, we investigated the impact of various feature categories.

Methods:

We employed cerebellar volume and voxel-wise normative models that were introduced in (Kim et al., 2023) which trained on more than 27k individuals across 132 scanning sites, with an age range spanning from 3 to 85 years. The test set comprised more than 26k individuals without a diagnosis, along with clinical sets of 1,757 (Figure 1A). The cerebellar volume normative model utilised ACAPULCO (Han et al., 2020) algorithm, a convolutional neural network-based algorithm that divides the cerebellum into 28 lobules and voxel-wise model used SUIT (Spatially Unbiased Infratentorial Toolbox) (Diedrichsen et al., 2009) toolbox (Figure 1B). The spatial precision normative models enabled integration with existing cerebellar atlases, including 28 anatomical cerebellar regions, 10 regions of interest from the multi-domain task battery (MDTB) (King et al., 2019), and 17 regions of interest from resting-state connectivity (Buckner et al., 2011; Yeo et al., 2011). Here, we developed different machine learning models using raw scores, median and percentage of extreme deviation (threshold at |z| > 1.96) from the normative model mapped onto existing atlases as features (Figure 1C). Deviation score assess how an individuals deviate from individuals without diagnosis at each lobule or voxel in the cerebellum. We assessed the diagnostic accuracy using the area under the receiver operating characteristic curve (ROAUC) with matched samples of the sites and age, addressing the imbalanced dataset with the synthetic minority oversampling technique (SMOTE) (Chawla et al., 2002) which were compared using 1000 permutations (Figure 1D). The models were explained by employing Shapley Additive Explanations to underscore the influence of each individual feature.
Supporting Image: figure_1.png
 

Results:

In our investigation, the voxel-wise models yielded slightly higher ROAUC performance compared to volumetric models (Figure 2A). The ROAUC values that surpassed chance levels are displayed in the figure. In the voxel-wise models, methods that used extreme negative percentage of deviations as features outperformed extreme positive percentage of deviations in the all three atlases. Notably, ASD, MCI and SCZ model predictions were better than BD and AD. Shapley Additive Explanation (SHAP) showed that regions important for predictions, where Figure 2B displays the extreme deviation of SHAP values.
Supporting Image: figure_2.png
 

Conclusions:

We discovered that voxel-wise models that utilize percentage of extreme negative deviation exhibited superior performance in classifying mental and neurological disorders, while across atlases showed similar performance. We demonstrated the advantages of implementing normative modelling features in the classification. This underscores the constraints posed by anatomical boundaries of the cerebellum and highlights the importance of employing a functional map of the cerebellum.

Disorders of the Nervous System:

Neurodegenerative/ Late Life (eg. Parkinson’s, Alzheimer’s)
Neurodevelopmental/ Early Life (eg. ADHD, autism)
Psychiatric (eg. Depression, Anxiety, Schizophrenia) 2

Lifespan Development:

Early life, Adolescence, Aging

Modeling and Analysis Methods:

Classification and Predictive Modeling 1

Keywords:

Aging
Autism
Cerebellum
Computational Neuroscience
Degenerative Disease
Machine Learning
Psychiatric Disorders
Schizophrenia
STRUCTURAL MRI
Other - Normative modelling

1|2Indicates the priority used for review

Provide references using author date format

Buckner, R. L., et al. (2011). 'The organization of the human cerebellum estimated by intrinsic functional connectivity', Journal of Neurophysiology, vol.106, no. 5, pp. 2322–2345.
Chawla, N. V., et al. (2002). 'SMOTE: Synthetic Minority Over-sampling Technique', Journal of Artificial Intelligence Research, vol.16, pp 321–357.
Diedrichsen, J., et al. (2009). 'A probabilistic MR atlas of the human cerebellum', NeuroImage, vol. 46, no. 1, pp. 39–46.
Han, S., et al. (2020). 'Automatic cerebellum anatomical parcellation using U-Net with locally constrained optimization', NeuroImage, vol. 218, no. 116819.
Kim, M., et al. (2023). 'Mapping Cerebellar Anatomical Heterogeneity in Mental and Neurological Illnesses', bioRxiv, 2023.11.18.567647.
King, M., et al. (2019). 'Functional boundaries in the human cerebellum revealed by a multi-domain task battery', Nature Neuroscience, vol. 22, no. 8, pp. 1371–1378.
Yeo, B. T. T., et al.(2011). 'The organization of the human cerebral cortex estimated by intrinsic functional connectivity', Journal of Neurophysiology, vol. 106, no. 3, pp.125–1165